The supplementary materials

F. Gao, H.-Y. Ou, L.-L. Chen, Zheng W.-X.and C.-T. Zhang (2003).Prediction of proteinase cleavage sites in polyproteins of coronaviruses and its applications in analyzing SARS-CoV genomes.FEBS Letters, 553, 451-456.
Table 1
   
   
 
The supplementary materials for
F. Gao, H.-Y. Ou, L.-L. Chen, Zheng W.-X.and C.-T. Zhang (2003).Prediction of proteinase cleavage sites in polyproteins of coronaviruses and its applications in analyzing SARS-CoV genomes.FEBS Letters, 553, 451-456.
Table 1. The prediction results of cleavage sites for 24 coronavirus genomes.
No.
Locus
Summary
Abbr.
1
NC_004718
2
NC_002645
3
NC_001846
4
NC_003045
5
NC_001451
6
NC_002306
7
NC_003436
8
U00735
9
AF391542
10
AF220295
11
AF208067
12
AF201929
13
AF208066
14
AY278741
15
AY278488
16
AY278554
17
AY282752
18
AY278491
19
AY291451
20
AY283794
21
AY283795
22
AY283796
23
AY283797
24
AY283798
SARS coronavirus isolate SIN2774 SIN2774
[TOP]
No.
Genome
Location (bp) Location (a.a.)
Length (a.a.)
Cleavage peptide
Feature
Alternative cleavage site
Start
Stop
Start
Stop
1
NC_004718


TOR2

265
801
1
179
179
-
PCP CP1
-
802
2718
180
818
639
TRELNG|GAVTRY
PCP CP2
2719
8484
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8485
9984
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9985
10902
3241
3546
306
AVLQ|SGFR
nsp2
10903
11772
3547
3836
290
VTFQ|GKFK
nsp3
11773
12021
3837
3919
83
ATVQ|SKMS
nsp4
12022
12615
3920
4117
198
ATLQ|AIAS
nsp5
12616
12954
4118
4230
113
VKLQ|NNEL
nsp6
12955
13371
4231
4369
139
VRLQ|AGNA
nsp7
13372
16166
4370
5301
932
PLMQ|SADA
nsp9
16167
17969
5302
5902
601
TVLQ|AVGA
nsp10
17970
19550
5903
6429
527
ATLQ|AENV
nsp11
19551
20588
6430
6775
346
TRLQ|SLEN
nsp12
20589
21482
6776
7073
298
PKLQ|ASQA
nsp13
2
NC_002645


HCoV-229E

293
625
1
111
111
-
PCP CP1
-
626
2983
112
897
786
GKRGGG|NVTYTD
PCP CP2
2984
7744
898
2484
1587
FTKAAG|GKVSFS
PCP CP3
7745
9187
2485
2965
481
VAKQGA|GDAGHS
PCP CP4
9188
10093
2966
3267
302
STLQ|AGLR
nsp2
10094
10930
3268
3546
279
VNLQ|SGKT
nsp3
10931
11179
3547
3629
83
STVQ|SKLT
nsp4
11180
11764
3630
3824
195
SILQ|SVAS
nsp5
11765
12091
3825
3933
109
VKLQ|NNEI
nsp6
12092
12496
3934
4068
135
VRLQ|AGKQ
nsp7
12497
15276
4069
4995
927
TAIQ|SFDN
nsp9
15277
17067
4996
5592
597
TVLQ|AAGL
nsp10
17068
18621
5593
6110
518
TDLQ|SESS
nsp11
18622
19665
6111
6458
348
VNLQ|GLEN
nsp12
19666
20565
6459
6758
300
PQLQ|SAEW
nsp13
3
NC_001846


MHV

210
950
1
247
247
-
PCP CP1

* QALQ|SEFV

(Q-4015|S-4016)

951
2705
248
832
585
LKGYRG|VKPILF
PCP CP2
2706
8720
833
2837
2005
WRFPCA|GKKVEF
PCP CP3
8721
10208
2838
3333
496
FSLKGG|AVFSRM
PCP CP4
10209
11117
3334
3636
303
SFLQ|SGIV
nsp2
11118
11978
3637
3923
287
VKLQ|SKRT
nsp3
11979
12245
3924
4012
89
SQIQ|SRLT
nsp4
12246
12836
4013
4209
197
TVLQ|ALQS
nsp5 *
12837
13166
4210
4319
110
VVLQ|NNEL
nsp6
13167
13577
4320
4456
137
VRLQ|AGTA
nsp7
13578
16360
4457
5384
928
SQFQ|SKDT
nsp9
16361
18160
5385
5984
600
AVLQ|SVGA
nsp10
18161
19723
5985
6505
521
PRLQ|CTTN
nsp11
19724
20845
6506
6879
374
TRLQ|SLEN
nsp12
20846
21742
6880
7178
299
PRLQ|AAAD
nsp13
4
NC_003045


BCoV

211
948
1
246
246
-
PCP CP1

* QALQ|SEFV

(Q-3928|S-3929)

949
2763
247
851
605
IRGYRG|VKPLLY
PCP CP2
2764
8460
852
2750
1899
WRVPCA|GRRVTF
PCP CP3
8461
9948
2751
3246
496
FSLKGG|AVFSYF
PCP CP4
9949
10857
3247
3549
303
SFLQ|SGIV
nsp2
10858
11718
3550
3836
287
IKLQ|SKRT
nsp3
11719
11985
3837
3925
89
SQFQ|SKLT
nsp4
11986
12576
3926
4122
197
TVLQ|ALQS
nsp5 *
12577
12906
4123
4232
110
TVLQ|NNEL
nsp6
12907
13317
4233
4369
137
VRLQ|AGTA
nsp7
13318
16100
4370
5297
928
TTVQ|SKDT
nsp9
16101
17909
5298
5900
603
AVMQ|SVGA
nsp10
17910
19472
5901
6421
521
TRVQ|CSTN
nsp11
19473
20594
6422
6795
374
TKLQ|SLEN
nsp12
20595
21491
6796
7094
299
PRLQ|AASD
nsp13
5
NC_001451


IBV

529
753
1
75
75
-
PCP CP1
-
754
2547
76
673
598
LFLLKG|VDKITP
PCP CP2
2548
7323
674
2265
1592
VVCKAG|GKTVTF
PCP CP3
7324
8865
2266
2779
514
VEKKAG|GIVSGT
PCP CP4
8866
9786
2780
3086
307
SRLQ|SGFK
nsp2
9787
10665
3087
3379
293
VRLQ|SSFV
nsp3
10666
10914
3380
3462
83
ATVQ|AKLS
nsp4
10915
11544
3463
3672
210
TVLQ|SVTQ
nsp5
11545
11877
3673
3783
111
VVLQ|NNEL
nsp6
11878
12312
3784
3928
145
VVLQ|SKGH
nsp7
12313
15131
3929
4868
940
SSVQ|SVAG
nsp9
15132
16931
4869
5468
600
TTLQ|SCGV
nsp10
16932
18494
5469
5989
521
TSLQ|GTGL
nsp11
18495
19508
5990
6327
338
SALQ|SIDN
nsp12
19509
20414
6328
6629
302
PQLQ|SAWT
nsp13
6
NC_002306

TGEV

315
638
1
108
108
-
PCP CP1
-
639
2951
109
879
771
KIARTG|RGAIYV
PCP CP2
2952
7478
880
2388
1509
YNKMGG|GDKTVS
PCP CP3
7479
8948
2389
2878
490
VSPKSG|SGFFDV
PCP CP4
8949
9854
2879
3180
302
STLQ|SGLR
nsp2
9855
10736
3181
3474
294
VNLQ|AGKV
nsp3
10737
10985
3475
3557
83
STVQ|SKLT
nsp4
10986
11570
3558
3752
195
TILQ|SVAS
nsp5
11571
11903
3753
3863
111
TKLQ|NNEI
nsp6
11904
12308
3864
3998
135
VRLQ|AGKP
nsp7
12309
15094
3999
4927
929
TSMQ|SFTV
nsp9
15095
16891
4928
5526
599
TVLQ|AAGM
nsp10
16892
18448
5527
6045
519
IGLQ|AKPE
nsp11
18449
19465
6046
6384
339
KALQ|SLEN
nsp12
19466
20365
6385
6684
300
PQLQ|SAEW
nsp13
7
NC_003436


PEDV

297
626
1
110
110
-
PCP CP1
-
627
2981
111
895
785
FGRRGG|NIVPVD
PCP CP2
2982
7847
896
2517
1622
FKKKGG|GDVKFS
PCP CP3
7848
9287
2518
2997
480
ANKKGA|GLPSFS
PCP CP4
9288
10193
2998
3299
302
STLQ|AGLR
nsp2
10194
11033
3300
3579
280
VNLQ|GGYV
nsp3
11034
11282
3580
3662
83
SSVQ|SKLT
nsp4
11283
11867
3663
3857
195
SMLQ|SVAS
nsp5
11868
12191
3858
3965
108
VKLQ|NNEI
nsp6
12192
12596
3966
4100
135
VRLQ|AGKQ
nsp7
12597
15376
4101
5027
927
SIMQ|STDM
nsp9
15377
17167
5028
5624
597
AVLQ|SAGL
nsp10
17168
18718
5625
6141
517
SDLQ|ANEG
nsp11
18719
19735
6142
6480
339
NNLQ|GLEN
nsp12
19736
20638
6481
6781
301
PQLQ|ASEW
nsp13
8
U00735


BCoVM

211
948
1
246
246
-
PCP CP1

* QALQ|SEFV

(Q-3928|S-3929)

949
2763
247
851
605
IRGYRG|VKPLLY
PCP CP2
2764
8460
852
2750
1899
WRVPCA|GRCVTF
PCP CP3
8461
9948
2751
3246
496
FSLKGG|AVFSYF
PCP CP4
9949
10857
3247
3549
303
SFLQ|SGIV
nsp2
10858
11718
3550
3836
287
IKLQ|SKRT
nsp3
11719
11985
3837
3925
89
SQFQ|SKLT
nsp4
11986
12576
3926
4122
197
TVLQ|ALQS
nsp5 *
12577
12906
4123
4232
110
TALQ|NNEL
nsp6
12907
13317
4233
4369
137
VRLQ|AGTA
nsp7
13318
16100
4370
5297
928
TTVQ|SKDT
nsp9
16101
17909
5298
5900
603
AVMQ|SVGA
nsp10
17910
19472
5901
6421
521
TRVQ|CSTN
nsp11
19473
20594
6422
6795
374
TKLQ|SLEN
nsp12
20595
21491
6796
7094
299
LRLQ|AASD
nsp13
9
AF391542


BCoVL

211
948
1
246
246
-
PCP CP1

* QALQ|SEFV

(Q-3928|S-3929)

949
2763
247
851
605
IRGYRG|VKPLLY
PCP CP2
2764
8460
852
2750
1899
WRVPCA|GRRVTF
PCP CP3
8461
9948
2751
3246
496
FSLKGG|AVFSYF
PCP CP4
9949
10857
3247
3549
303
SFLQ|SGIV
nsp2
10858
11718
3550
3836
287
IKLQ|SKRT
nsp3
11719
11985
3837
3925
89
SQFQ|SKLT
nsp4
11986
12576
3926
4122
197
TVLQ|ALQS
nsp5 *
12577
12906
4123
4232
110
TVLQ|NNEL
nsp6
12907
13317
4233
4369
137
VRLQ|AGTA
nsp7
13318
16100
4370
5297
928
TTVQ|SKDT
nsp9
16101
17909
5298
5900
603
AVMQ|SVGA
nsp10
17910
19472
5901
6421
521
TRVQ|CSTN
nsp11
19473
20594
6422
6795
374
TKLQ|SLEN
nsp12
20595
21491
6796
7094
299
PRLQ|AASD
nsp13
10
AF220295


BCoVQ

211
948
1
246
246
-
PCP CP1

* QALQ|SEFV

(Q-3928|S-3929)

949
2763
247
851
605
IRGYRG|VKPLLY
PCP CP2
2764
8460
852
2750
1899
WRVPCA|GRCVTF
PCP CP3
8461
9948
2751
3246
496
FSLKGG|AVFSYF
PCP CP4
9949
10857
3247
3549
303
SFLQ|SGIV
nsp2
10858
11718
3550
3836
287
IKLQ|SKRT
nsp3
11719
11985
3837
3925
89
SQFQ|SKLT
nsp4
11986
12576
3926
4122
197
TVLQ|ALQS
nsp5 *
12577
12906
4123
4232
110
TVLQ|NNEL
nsp6
12907
13317
4233
4369
137
VRLQ|AGTA
nsp7
13318
16100
4370
5297
928
TTVQ|SKDT
nsp9
16101
17909
5298
5900
603
AVMQ|SVGA
nsp10
17910
19472
5901
6421
521
TRVQ|CSTN
nsp11
19473
20594
6422
6795
374
TKLQ|SLEN
nsp12
20595
21386
6796
7059
264
PRLQ|AASD
nsp13
11
AF208067


MHVM

201
941
1
247
247
-
PCP CP1

* QALQ|SEFV

(Q-4015|S-4016)

942
2696
248
832
585
LKGYRG|VKPILF
PCP CP2
2697
8711
833
2837
2005
WRFPCA|GKKVEF
PCP CP3
8712
10199
2838
3333
496
FSLKGG|AVFSRM
PCP CP4
10200
11108
3334
3636
303
SFLQ|SGIV
nsp2
11109
11969
3637
3923
287
VKLQ|SKRT
nsp3
11970
12236
3924
4012
89
SQIQ|SRLT
nsp4
12237
12827
4013
4209
197
TVLQ|ALQS
nsp5 *
12828
13157
4210
4319
110
VVLQ|NNEL
nsp6
13158
13568
4320
4456
137
VRLQ|AGTA
nsp7
13569
16351
4457
5384
928
SQFQ|SKDT
nsp9
16352
18151
5385
5984
600
AVLQ|SVGA
nsp10
18152
19714
5985
6505
521
PRLQ|CTTN
nsp11
19715
20836
6506
6879
374
TRLQ|SLEN
nsp12
20837
21733
6880
7178
299
PRLQ|AAAD
nsp13
12
AF201929


MHV2

210
950
1
247
247
-
PCP CP1

* QALQ|SEFV

(Q-3961|S-3962)

951
2705
248
832
585
LKGYRG|VKSILF
PCP CP2
2706
8558
833
2783
1951
WRFPCA|GKKVEF
PCP CP3
8559
10046
2784
3279
496
FSLKGG|AVFSKV
PCP CP4
10047
10955
3280
3582
303
SFLQ|SGIV
nsp2
10956
11816
3583
3869
287
VKLQ|SKRT
nsp3
11817
12083
3870
3958
89
SQIQ|SRLT
nsp4
12084
12674
3959
4155
197
TVLQ|ALQS
nsp5 *
12675
13004
4156
4265
110
VVLQ|NNEL
nsp6
13005
13415
4266
4402
137
VRLQ|AGTA
nsp7
13416
16198
4403
5330
928
SQFQ|SKDT
nsp9
16199
17998
5331
5930
600
AVMQ|SVGA
nsp10
17999
19561
5931
6451
521
PRLQ|CTTN
nsp11
19562
20683
6452
6825
374
TRLQ|SLEN
nsp12
20684
21580
6826
7124
299
PRLQ|AAAD
nsp13
13
AF208066


MHVP

210
950
1
247
247
-
PCP CP1

* QALQ|SEFV

(Q-3961|S-3962)

951
2705
248
832
585
LKGYRG|VKSILF
PCP CP2
2706
8558
833
2783
1951
WRFPCA|GKKVEF
PCP CP3
8559
10046
2784
3279
496
FSLKGG|AVFSKV
PCP CP4
10047
10955
3280
3582
303
SFLQ|SGIV
nsp2
10956
11816
3583
3869
287
VKLQ|SKRT
nsp3
11817
12083
3870
3958
89
SQIQ|SRLT
nsp4
12084
12674
3959
4155
197
TVLQ|ALQS
nsp5 *
12675
13004
4156
4265
110
VVLQ|NNEL
nsp6
13005
13415
4266
4402
137
VRLQ|AGTA
nsp7
13416
16195
4403
5329
927
SQFQ|SKDT
nsp9
16196
17995
5330
5929
600
AVMQ|SVGA
nsp10
17996
19558
5930
6450
521
PRLQ|CTTN
nsp11
19559
20680
6451
6824
374
TRLQ|SLEN
nsp12
20681
21577
6825
7123
299
PRLQ|AAAD
nsp13
14
AY278741


Urbani

265
801
1
179
179
-
PCP CP1
-
802
2718
180
818
639
TRELNG|GAVTRY
PCP CP2
2719
8484
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8485
9984
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9985
10902
3241
3546
306
AVLQ|SGFR
nsp2
10903
11772
3547
3836
290
VTFQ|GKFK
nsp3
11773
12021
3837
3919
83
ATVQ|SKMS
nsp4
12022
12615
3920
4117
198
ATLQ|AIAS
nsp5
12616
12954
4118
4230
113
VKLQ|NNEL
nsp6
12955
13371
4231
4369
139
VRLQ|AGNA
nsp7
13372
16166
4370
5301
932
PLMQ|SADA
nsp9
16167
17969
5302
5902
601
TVLQ|AVGA
nsp10
17970
19550
5903
6429
527
ATLQ|AENV
nsp11
19551
20588
6430
6775
346
TRLQ|SLEN
nsp12
20589
21482
6776
7073
298
PKLQ|ASQA
nsp13
15
AY278488


BJ01

246
782
1
179
179
-
PCP CP1
-
783
2699
180
818
639
TRELNG|GAVTRY
PCP CP2
2700
8465
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8466
9965
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9966
10883
3241
3546
306
AVLQ|SGFR
nsp2
10884
11753
3547
3836
290
VTFQ|GKFK
nsp3
11754
12002
3837
3919
83
ATVQ|SKMS
nsp4
12003
12596
3920
4117
198
ATLQ|AIAS
nsp5
12597
12935
4118
4230
113
VKLQ|NNEL
nsp6
12936
13352
4231
4369
139
VRLQ|AGNA
nsp7
13353
16147
4370
5301
932
PLMQ|SADA
nsp9
16148
17950
5302
5902
601
TVLQ|AVGA
nsp10
17951
19531
5903
6429
527
ATLQ|AENV
nsp11
19532
20569
6430
6775
346
TRLQ|SLEN
nsp12
20570
21463
6776
7073
298
PKLQ|ASQA
nsp13
16
AY278554


CUHK-W1

250
786
1
179
179
-
PCP CP1
-
787
2703
180
818
639
TRELNG|GAVTRY
PCP CP2
2704
8469
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8470
9969
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9970
10887
3241
3546
306
AVLQ|SGFR
nsp2
10888
11757
3547
3836
290
VTFQ|GKFK
nsp3
11758
12006
3837
3919
83
ATVQ|SKMS
nsp4
12007
12600
3920
4117
198
ATLQ|AIAS
nsp5
12601
12939
4118
4230
113
VKLQ|NNEL
nsp6
12940
13356
4231
4369
139
VRLQ|AGNA
nsp7
13357
16151
4370
5301
932
PLMQ|SADA
nsp9
16152
17954
5302
5902
601
TVLQ|AVGA
nsp10
17955
19535
5903
6429
527
ATLQ|AENV
nsp11
19536
20573
6430
6775
346
TRLQ|SLEN
nsp12
20574
21467
6776
7073
298
PKLQ|ASQA
nsp13
17
AY282752


CUHK-Su10

250
786
1
179
179
-
PCP CP1
-
787
2703
180
818
639
TRELNG|GAVTRY
PCP CP2
2704
8469
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8470
9969
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9970
10887
3241
3546
306
AVLQ|SGFR
nsp2
10888
11757
3547
3836
290
VTFQ|GKFK
nsp3
11758
12006
3837
3919
83
ATVQ|SKMS
nsp4
12007
12600
3920
4117
198
ATLQ|AIAS
nsp5
12601
12939
4118
4230
113
VKLQ|NNEL
nsp6
12940
13356
4231
4369
139
VRLQ|AGNA
nsp7
13357
16151
4370
5301
932
PLMQ|SADA
nsp9
16152
17954
5302
5902
601
TVLQ|AVGA
nsp10
17955
19535
5903
6429
527
ATLQ|AENV
nsp11
19536
20573
6430
6775
346
TRLQ|SLEN
nsp12
20574
21467
6776
7073
298
PKLQ|ASQA
nsp13
18
AY278491


HKU-39849

265
801
1
179
179
-
PCP CP1
-
802
2718
180
818
639
TRELNG|GAVTRY
PCP CP2
2719
8484
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8485
9984
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9985
10902
3241
3546
306
AVLQ|SGFR
nsp2
10903
11772
3547
3836
290
VTFQ|GKFK
nsp3
11773
12021
3837
3919
83
ATVQ|SKMS
nsp4
12022
12615
3920
4117
198
ATLQ|AIAS
nsp5
12616
12954
4118
4230
113
VKLQ|NNEL
nsp6
12955
13371
4231
4369
139
VRLQ|AGNA
nsp7
13372
16166
4370
5301
932
PLMQ|SADA
nsp9
16167
17969
5302
5902
601
TVLQ|AVGA
nsp10
17970
19550
5903
6429
527
ATLQ|AENV
nsp11
19551
20588
6430
6775
346
TRLQ|SLEN
nsp12
20589
21482
6776
7073
298
PKLQ|ASQA
nsp13
19
AY291451


TW1

265
801
1
179
179
-
PCP CP1
-
802
2718
180
818
639
TRELNG|GAVTRY
PCP CP2
2719
8484
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8485
9984
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9985
10902
3241
3546
306
AVLQ|SGFR
nsp2
10903
11772
3547
3836
290
VTFQ|GKFK
nsp3
11773
12021
3837
3919
83
ATVQ|SKMS
nsp4
12022
12615
3920
4117
198
ATLQ|AIAS
nsp5
12616
12954
4118
4230
113
VKLQ|NNEL
nsp6
12955
13371
4231
4369
139
VRLQ|AGNA
nsp7
13372
16166
4370
5301
932
PLMQ|SADA
nsp9
16167
17969
5302
5902
601
TVLQ|AVGA
nsp10
17970
19550
5903
6429
527
ATLQ|AENV
nsp11
19551
20588
6430
6775
346
TRLQ|SLEN
nsp12
20589
21482
6776
7073
298
PKLQ|ASQA
nsp13
20
AY283794


SIN2500

249
785
1
179
179
-
PCP CP1
-
786
2702
180
818
639
TRELNG|GAVTRY
PCP CP2
2703
8468
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8469
9968
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9969
10886
3241
3546
306
AVLQ|SGFR
nsp2
10887
11756
3547
3836
290
VTFQ|GKFK
nsp3
11757
12005
3837
3919
83
ATVQ|SKMS
nsp4
12006
12599
3920
4117
198
ATLQ|AIAS
nsp5
12600
12938
4118
4230
113
VKLQ|NNEL
nsp6
12939
13355
4231
4369
139
VRLQ|AGNA
nsp7
13356
16150
4370
5301
932
PLMQ|SADA
nsp9
16151
17953
5302
5902
601
TVLQ|AVGA
nsp10
17954
19534
5903
6429
527
ATLQ|AENV
nsp11
19535
20572
6430
6775
346
TRLQ|SLEN
nsp12
20573
21466
6776
7073
298
PKLQ|ASQA
nsp13
21
AY283795


SIN2677

249
785
1
179
179
-
PCP CP1
-
786
2702
180
818
639
TRELNG|GAVTRY
PCP CP2
2703
8468
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8469
9968
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9969
10886
3241
3546
306
AVLQ|SGFR
nsp2
10887
11756
3547
3836
290
VTFQ|GKFK
nsp3
11757
12005
3837
3919
83
ATVQ|SKMS
nsp4
12006
12599
3920
4117
198
ATLQ|AIAS
nsp5
12600
12938
4118
4230
113
VKLQ|NNEL
nsp6
12939
13355
4231
4369
139
VRLQ|AGNA
nsp7
13356
16150
4370
5301
932
PLMQ|SADA
nsp9
16151
17953
5302
5902
601
TVLQ|AVGA
nsp10
17954
19534
5903
6429
527
ATLQ|AENV
nsp11
19535
20572
6430
6775
346
TRLQ|SLEN
nsp12
20573
21466
6776
7073
298
PKLQ|ASQA
nsp13
22
AY283796


SIN2679

249
785
1
179
179
-
PCP CP1
-
786
2702
180
818
639
TRELNG|GAVTRY
PCP CP2
2703
8468
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8469
9968
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9969
10886
3241
3546
306
AVLQ|SGFR
nsp2
10887
11756
3547
3836
290
VTFQ|GKFK
nsp3
11757
12005
3837
3919
83
ATVQ|SKMS
nsp4
12006
12599
3920
4117
198
ATLQ|AIAS
nsp5
12600
12938
4118
4230
113
VKLQ|NNEL
nsp6
12939
13355
4231
4369
139
VRLQ|AGNA
nsp7
13356
16150
4370
5301
932
PLMQ|SADA
nsp9
16151
17953
5302
5902
601
TVLQ|AVGA
nsp10
17954
19534
5903
6429
527
ATLQ|AENV
nsp11
19535
20572
6430
6775
346
TRLQ|SLEN
nsp12
20573
21466
6776
7073
298
PKLQ|ASQA
nsp13
23
AY283797


SIN2748

249
785
1
179
179
-
PCP CP1
-
786
2702
180
818
639
TRELNG|GAVTRY
PCP CP2
2703
8468
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8469
9968
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9969
10886
3241
3546
306
AVLQ|SGFR
nsp2
10887
11756
3547
3836
290
VTFQ|GKFK
nsp3
11757
12005
3837
3919
83
ATVQ|SKMS
nsp4
12006
12599
3920
4117
198
ATLQ|AIAS
nsp5
12600
12938
4118
4230
113
VKLQ|NNEL
nsp6
12939
13355
4231
4369
139
VRLQ|AGNA
nsp7
13356
16150
4370
5301
932
PLMQ|SADA
nsp9
16151
17953
5302
5902
601
TVLQ|AVGA
nsp10
17954
19534
5903
6429
527
ATLQ|AENV
nsp11
19535
20572
6430
6775
346
TRLQ|SLEN
nsp12
20573
21466
6776
7073
298
PKLQ|ASQA
nsp13
24
AY283798


SIN2774

249
785
1
179
179
-
PCP CP1
-
786
2702
180
818
639
TRELNG|GAVTRY
PCP CP2
2703
8468
819
2740
1922
FRLKGG|APIKGV
PCP CP3
8469
9968
2741
3240
500
ISLKGG|KIVSTC
PCP CP4
9969
10886
3241
3546
306
AVLQ|SGFR
nsp2
10887
11756
3547
3836
290
VTFQ|GKFK
nsp3
11757
12005
3837
3919
83
ATVQ|SKMS
nsp4
12006
12599
3920
4117
198
ATLQ|AIAS
nsp5
12600
12938
4118
4230
113
VKLQ|NNEL
nsp6
12939
13355
4231
4369
139
VRLQ|AGNA
nsp7
13356
16150
4370
5301
932
PLMQ|SADA
nsp9
16151
17953
5302
5902
601
TVLQ|AVGA
nsp10
17954
19534
5903
6429
527
ATLQ|AENV
nsp11
19535
20572
6430
6775
346
TRLQ|SLEN
nsp12
20573
21466
6776
7073
298
PKLQ|ASQA
nsp13
 
[TOP]
TUBIC 2003