DoriC database

cagccaccgcagcacgtcgctgagggcgccccgggacgattcccgagggcgccctcttcgtcttcccaagggccccttcggcctctccgagggcggcaaggcgtcctccgcctgctgctgccgaaggcccgcttcgaaggcccgctcgctactcccaaaggcccgctcactgcttccgagagcgttcagcgccgttccccaggacgtctttcgccggtcctgaggcgtctttcgccgctctcaaggacgttcttcgccgcttccgaggccgcgtgcggggcgccgacgggccgtgcaccgtccacccgctgttcgaatacgagccgagttacggccgccctccacagatatgcggactttctcgcgtccacaccctggggactgggaagttgtccagatcgtgtccacagggtgtgctgttaaaagaccatcgtcccagctcaacagcttgtggattggtggacagaagatctccacagactgtggacagagtgaTGATCCACAgcctgtgcaccaagttgtccaccggcggcccacaggctgagccccgttgtccccagcaaaacccagcTTCTCCACAcggctgtccactgttcggcaacgcgacgcgcctgctcaccgtgtcgagtgaaaggcgtcacaccaaggtgccgggttggcctgtggggaacgtgggtaaagctggggacggcgttggggagaagtgccccaagcctgtgcatcgagtgtgcagaacttttcgctgtccacagatgaccccggttgtccaccgcctccacccacagggtcagtggacaaaatttggggcctgacctgcgaaaacgaggTTATCCACGgtttccacaggccctactactactcccaactagagagagctgggaatccgcttcgaagggggccctgtgcacaactcgctgtctcggccccggctgccgctcgacgcgacttgacccagggcggcaacgactgtcagtgcggtgcgtcagactggtcaccggtgtcctgcccctcacagggatcgacgacaccgagtcagacgacgaaggccaggcagggcgagagcgccggcaatagcaggaggcggcttacg

The following lines contain repeats found, one line each.
[1] - repeat length of the first part
[2] - starting position of the first part
[4] - repeat length of the second part
[5] - starting position of the second part
[6] - distance of this repeat
[7] - calculated evalue of this repeat
[8] - repeat sequence

For more details, please refer to The Manual of REPuter.

15 92 C 15 189 -1 1.40e-02 gcggcaagg[cg]gtcct
15 204 F 15 225 -1 1.40e-02 cgtctttcgccg[gc]tc
15 472 P 15 472 -1 1.40e-02 tccacag[at]ctgtgga
12 44 P 12 44 0 1.99e-02 gagggcgccctc
12 121 F 12 134 0 1.99e-02 cgaaggcccgct
12 128 F 12 883 0 1.99e-02 ccgcttcgaagg
12 251 R 12 251 0 1.99e-02 cttcgccgcttc
12 919 R 12 919 0 1.99e-02 tcggccccggct
14 125 P 14 886 -1 5.23e-02 ggccc[gc]cttcgaag
14 136 F 14 157 -1 5.23e-02 aaggcccgctc[ga]ct
14 368 P 14 402 -1 5.23e-02 cacaccctg[gt]ggac
11 101 C 11 1073 0 7.97e-02 cgtcctccgcc
11 517 F 11 761 0 7.97e-02 gttgtccaccg
13 86 F 13 950 -1 1.94e-01 cc[gc]agggcggcaa
13 120 F 13 154 -1 1.94e-01 cc[ga]aaggcccgct
13 472 F 13 498 -1 1.94e-01 tccacag[ac]ctgtg
13 474 P 13 498 -1 1.94e-01 cacag[ag]ctgtgga
10 21 F 10 44 0 3.19e-01 gagggcgccc
10 21 P 10 46 0 3.19e-01 gagggcgccc
10 148 F 10 855 0 3.19e-01 ctactcccaa
10 386 F 10 515 0 3.19e-01 aagttgtcca
10 480 P 10 742 0 3.19e-01 ctgtggacag
10 503 F 10 711 0 3.19e-01 agcctgtgca
12 1 R 12 1019 -1 7.17e-01 agccac[ca]gcagc
12 63 F 12 152 -1 7.17e-01 tcccaa[ga]ggccc
12 101 R 12 106 -1 7.17e-01 cgtc[cg]tccgcct
12 107 P 12 1072 -1 7.17e-01 ccgcct[gc]ctgct
12 111 C 12 1035 -1 7.17e-01 ctgctgct[gt]ccg
9 24 P 9 275 0 1.27e+00 ggcgccccg
9 28 C 9 894 0 1.27e+00 ccccgggac
9 42 F 9 86 0 1.27e+00 ccgagggcg
9 80 R 9 80 0 1.27e+00 gcctctccg
9 88 P 9 333 0 1.27e+00 gagggcggc
9 169 C 9 1038 0 1.27e+00 ctgcttccg
9 171 F 9 258 0 1.27e+00 gcttccgag
9 183 R 9 940 0 1.27e+00 gttcagcgc
9 192 P 9 663 0 1.27e+00 cgttcccca
9 230 F 9 252 0 1.27e+00 ttcgccgct
9 230 R 9 253 0 1.27e+00 ttcgccgct
9 339 F 9 471 0 1.27e+00 ctccacaga
9 340 F 9 745 0 1.27e+00 tccacagat
9 401 F 9 743 0 1.27e+00 tgtccacag
9 401 P 9 480 0 1.27e+00 tgtccacag
9 404 F 9 779 0 1.27e+00 ccacagggt
9 433 P 9 872 0 1.27e+00 tcccagctc
9 458 F 9 482 0 1.27e+00 gtggacaga
9 502 P 9 534 0 1.27e+00 cagcctgtg
9 505 F 9 899 0 1.27e+00 cctgtgcac
9 525 R 9 525 0 1.27e+00 ccggcggcc
9 532 P 9 658 0 1.27e+00 cccacaggc