DoriC database

gcaaaacacctccatctttatacagttatctaatataccagattatgcagactctgatcacttcaatagataagattttgcgtttcttagattaaaattctcgtattagctcattgattatctagtcataattcaagcaactactacaatataacaaaatcctttttataacgcaagttcattttatactactgctcaatttttttacttttatcgattaaagatagaaatacacgatgcgagcaatcaaatttcataacatcaccatgagtttgatccaaagcatgagtgtttacaatgtttgaataccttatacagttcttatacatactttataaattatttcccaagctgttttgatacacacactaacagatactctatagaaggaaaagTTATCCACTTATGCACActtatactttttagaatTGTGGATAAttagaaattacacacaaagttatactatttttagcaacatattcacaggtatttgacatatagagaactgaaaaagtataattgTGTGGATAAgtcgtccaactcatgattttataaggatttatttattgatatttacataaaaatacTGTGCATAActaataagcaggataaagTTATCCACCgattgttattaactTGTGGATAAttattaacatggtgtgtttagaagTTATCCACGgttgttattttTGTGTATAActtaaaaatttaagaaagatggagtaaattt

The following lines contain repeats found, one line each.
[1] - repeat length of the first part
[2] - starting position of the first part
[4] - repeat length of the second part
[5] - starting position of the second part
[6] - distance of this repeat
[7] - calculated evalue of this repeat
[8] - repeat sequence

For more details, please refer to The Manual of REPuter.

16 403 R 16 475 -1 1.68e-03 ttatg[cg]acacttatac
16 408 P 16 508 -1 1.68e-03 caca[ca]ttatacttttt
13 218 R 13 218 0 2.23e-03 taaagatagaaat
13 428 F 13 636 0 2.23e-03 ttgtggataatta
12 391 F 12 610 0 8.93e-03 aaagttatccac
11 145 R 11 145 0 3.57e-02 acaatataaca
11 392 F 11 667 0 3.57e-02 aagttatccac
11 413 P 11 508 0 3.57e-02 ttatacttttt
11 576 R 11 576 0 3.57e-02 cataaaaatac
11 611 F 11 667 0 3.57e-02 aagttatccac
10 9 P 10 713 0 1.43e-01 ctccatcttt
10 17 F 10 310 0 1.43e-01 ttatacagtt
10 409 R 10 475 0 1.43e-01 acacttatac
12 139 R 12 255 -1 3.22e-01 ac[tc]actacaata
12 327 P 12 331 -1 3.22e-01 ata[ca]tttataaa
12 356 R 12 447 -1 3.22e-01 ttga[ta]acacaca
12 401 P 12 521 -1 3.22e-01 acttat[gc]cacac
12 574 P 12 684 -1 3.22e-01 taca[tc]aaaaata
12 697 R 12 700 -1 3.22e-01 aa[ct]ttaaaaatt
9 18 R 9 490 0 5.72e-01 tatacagtt
9 23 C 9 62 0 5.72e-01 agttatcta
9 60 C 9 666 0 5.72e-01 cttcaatag
9 64 R 9 64 0 5.72e-01 aatagataa
9 70 R 9 420 0 5.72e-01 taagatttt
9 76 R 9 76 0 5.72e-01 tttgcgttt
9 112 C 9 593 0 5.72e-01 attgattat
9 198 R 9 198 0 5.72e-01 attttttta
9 216 R 9 439 0 5.72e-01 attaaagat
9 311 R 9 490 0 5.72e-01 tatacagtt
9 403 P 9 587 0 5.72e-01 ttatgcaca
9 429 F 9 522 0 5.72e-01 tgtggataa
9 454 P 9 693 0 5.72e-01 aagttatac
9 506 R 9 506 0 5.72e-01 tgaaaaagt
9 522 F 9 637 0 5.72e-01 tgtggataa
9 557 R 9 557 0 5.72e-01 atttattta
9 559 R 9 559 0 5.72e-01 ttatttatt
9 644 R 9 644 0 5.72e-01 aattattaa
11 10 C 11 221 -1 1.18e+00 tc[ct]atctttat
11 19 F 11 608 -1 1.18e+00 ata[ca]agttatc
11 42 F 11 403 -1 1.18e+00 ttatgca[gc]act
11 62 P 11 559 -1 1.18e+00 tcaata[ga]ataa
11 82 P 11 705 -1 1.18e+00 tttctta[ga]att
11 141 C 11 543 -1 1.18e+00 tacta[ca]aatat
11 207 P 11 212 -1 1.18e+00 cttt[ta]atcgat
11 223 R 11 575 -1 1.18e+00 ata[ga]aaataca
11 264 R 11 299 -1 1.18e+00 ccat[ga]agtttg
11 265 P 11 535 -1 1.18e+00 catgagtt[tg]ga
11 279 P 11 539 -1 1.18e+00 aaa[gt]catgagt
11 335 C 11 706 -1 1.18e+00 taaatt[ac]tttc
11 361 R 11 443 -1 1.18e+00 acacaca[ct]taa