DoriC database

gcaaaacacctccatctttatacagttatctaatataccagattatgcagactctgatcactttaatagataagattttgcgtttcttagattaaaattctcgtattagctcattgattatctagtcataattcaagcaactactacaatataacaaaatcctatttataacgcaagttcattttatactactgctcaatttttttacttttatcgattaaagatagaaatacacgatgcgagcaatcaaatttcataacatcaccatgagtttggtccgaagcatgagtgtttacaatgttcgaacaccttatacagttcttatacatactttataaattatttcccaaactgttttgatacactcactaacagatactctatagaaggaaaagTTATCCACTTATGCACAtttatagttttcagaatTGTGGATAAttagaaattacacacaaagttatactatttttagcaacatattcacaggtatttgacatatagagaactgaaaaagtataattgTGTGGATAAgtcgtccaactcatgattttataaggatttatttattgatttttacataaaaatacTGTGCATAActaataagcaagataaagTTATCCACCgattgttattaactTGTGGATAAttattaacatggtgtgtttagaagTTATCCACGgctgttattttTGTGTATAActtaaaaatttaagaaagatggagtaaattt

The following lines contain repeats found, one line each.
[1] - repeat length of the first part
[2] - starting position of the first part
[4] - repeat length of the second part
[5] - starting position of the second part
[6] - distance of this repeat
[7] - calculated evalue of this repeat
[8] - repeat sequence

For more details, please refer to The Manual of REPuter.

13 218 R 13 218 0 2.23e-03 taaagatagaaat
13 428 F 13 636 0 2.23e-03 ttgtggataatta
12 391 F 12 610 0 8.93e-03 aaagttatccac
11 145 R 11 145 0 3.57e-02 acaatataaca
11 392 F 11 667 0 3.57e-02 aagttatccac
11 576 R 11 576 0 3.57e-02 cataaaaatac
11 611 F 11 667 0 3.57e-02 aagttatccac
13 60 P 13 210 -1 8.71e-02 ctttaat[ac]gataa
10 9 P 10 713 0 1.43e-01 ctccatcttt
10 17 F 10 310 0 1.43e-01 ttatacagtt
10 298 P 10 298 0 1.43e-01 tgttcgaaca
12 139 R 12 255 -1 3.22e-01 ac[tc]actacaata
12 327 P 12 331 -1 3.22e-01 ata[ca]tttataaa
12 409 R 12 566 -1 3.22e-01 acattt[at]tagtt
12 574 P 12 684 -1 3.22e-01 taca[tc]aaaaata
12 697 R 12 700 -1 3.22e-01 aa[ct]ttaaaaatt
9 18 R 9 490 0 5.72e-01 tatacagtt
9 64 R 9 64 0 5.72e-01 aatagataa
9 76 R 9 76 0 5.72e-01 tttgcgttt
9 112 C 9 593 0 5.72e-01 attgattat
9 198 R 9 198 0 5.72e-01 attttttta
9 216 R 9 439 0 5.72e-01 attaaagat
9 311 R 9 490 0 5.72e-01 tatacagtt
9 403 P 9 587 0 5.72e-01 ttatgcaca
9 429 F 9 522 0 5.72e-01 tgtggataa
9 454 P 9 693 0 5.72e-01 aagttatac
9 506 R 9 506 0 5.72e-01 tgaaaaagt
9 522 F 9 637 0 5.72e-01 tgtggataa
9 557 R 9 557 0 5.72e-01 atttattta
9 559 R 9 559 0 5.72e-01 ttatttatt
9 644 R 9 644 0 5.72e-01 aattattaa
11 10 C 11 221 -1 1.18e+00 tc[ct]atctttat
11 19 F 11 608 -1 1.18e+00 ata[ca]agttatc
11 63 C 11 116 -1 1.18e+00 taatagat[ac]ag
11 69 P 11 154 -1 1.18e+00 ata[ag]gattttg
11 82 P 11 705 -1 1.18e+00 tttctta[ga]att
11 141 C 11 543 -1 1.18e+00 tacta[ca]aatat
11 160 C 11 640 -1 1.18e+00 cctatt[ta]ataa
11 207 P 11 212 -1 1.18e+00 cttt[ta]atcgat
11 223 R 11 575 -1 1.18e+00 ata[ga]aaataca
11 335 C 11 706 -1 1.18e+00 taaatt[ac]tttc
11 392 P 11 691 -1 1.18e+00 aagttat[ca]cac
11 401 P 11 522 -1 1.18e+00 acttat[gc]caca
11 445 P 11 688 -1 1.18e+00 tta[ct]acacaaa
11 457 P 11 508 -1 1.18e+00 ttatact[at]ttt
11 557 F 11 561 -1 1.18e+00 atttatt[tg]att
11 564 C 11 592 -1 1.18e+00 tattgatt[ta]tt
11 564 C 11 695 -1 1.18e+00 tattga[ta]tttt
11 587 F 11 690 -1 1.18e+00 tgtg[ct]ataact
11 611 P 11 691 -1 1.18e+00 aagttat[ca]cac