DoriC database

ggtgaacactcctctaaattgttacaaggtgatatcgctgccggtgaccggctgcggtatcacccttgaattggatgattatcaaaacatagagagtcacacgccgcgctagtcacagtctcactagcggtgaaagtcttgacctcaacagggtcacaccgatgaacacgatgtgcatgctgagtcccttcgttcctggcggcactctcgttaaagcacttgcgattgacgtatatggtacgcccgttgcagtgacagacaacgaatagagtacgtgagcttgccccacttcaacaaatcgacacgccaatgagtcacacttacccctgtaatcgcaaatatgtaatttcacctttggttttccaagcgttggccggtcatcgacaatgaaatgacaaaaatcaacgttttctaccgtcagtaatccagccgcaatcacccccgcaccccacgtagcgcttttcacaagttggacaccgaaaaagacaaccgagtaacactacttgtgagaaaaaatcacatactgtgaaaaaccgtaccTGTGGATAActtttttatttttccaccgagTTTTCCACAaaaattacattcccgcaggtagaaccatacttttgggaatgaaattTTATCCACAgtgtgaaaaataaaaTGTGGATAActtttcacagtgagtcaacgtggattTTTTCCACAgcTGTGGAAAActctgtggaatacgcggtcaaagccgcaaaccagttgtggaaagttcagtggagttccggtggacgtcttgtggaaattacaaaaatTTATCCACCgcggattttcactccacatccccgcgctacgcggagattgttctgcgaatgcaatctcttcgtagctgccacaactggcgcacatcgtcgtcaatcattcgcttgaccttataaaggaagtacagtgtcggaaacgccatcc

The following lines contain repeats found, one line each.
[1] - repeat length of the first part
[2] - starting position of the first part
[4] - repeat length of the second part
[5] - starting position of the second part
[6] - distance of this repeat
[7] - calculated evalue of this repeat
[8] - repeat sequence

For more details, please refer to The Manual of REPuter.

20 684 P 20 684 0 2.27e-07 ttttccacagctgtggaaaa
19 560 P 19 695 -1 5.18e-05 ttccac[ca]gagttttccaca
14 540 F 14 649 0 9.30e-04 tgtggataactttt
12 567 P 12 695 0 1.49e-02 gagttttccaca
14 388 F 14 777 -1 3.90e-02 gaaat[gt]acaaaaat
14 541 P 14 785 -1 3.90e-02 gtggataa[ca]ttttt
14 548 R 14 551 -1 3.90e-02 ac[tc]tttttattttt
14 579 P 14 613 -1 3.90e-02 aaaatt[at]cattccc
11 552 P 11 638 0 5.95e-02 ttttatttttc
13 39 P 13 39 -1 1.45e-01 gccggt[gc]accggc
13 396 P 13 674 -1 1.45e-01 aaaaatc[ac]acgtt
13 620 F 13 786 -1 1.45e-01 aaa[ta]tttatccac
13 622 F 13 681 -1 1.45e-01 atttt[at]tccacag
13 636 R 13 640 -1 1.45e-01 gtg[at]aaaataaaa
13 650 P 13 786 -1 1.45e-01 gtggataa[ca]tttt
10 443 R 10 443 0 2.38e-01 gcaccccacg
10 522 P 10 659 0 2.38e-01 actgtgaaaa
10 539 P 10 625 0 2.38e-01 ctgtggataa
10 551 C 10 639 0 2.38e-01 tttttatttt
10 715 R 10 872 0 2.38e-01 acgcggtcaa
10 734 P 10 868 0 2.38e-01 ccagttgtgg
12 310 R 12 661 -1 5.36e-01 tgagt[cg]acactt
12 539 F 12 694 -1 5.36e-01 ctgtgga[ta]aact
12 556 F 12 789 -1 5.36e-01 attt[ta]tccaccg
12 685 P 12 735 -1 5.36e-01 tttccaca[ga]ctg
12 691 F 12 735 -1 5.36e-01 cag[ct]tgtggaaa
9 2 C 9 501 0 9.52e-01 tgaacactc
9 93 F 9 311 0 9.52e-01 gagtcacac
9 160 C 9 499 0 9.52e-01 gatgaacac
9 167 P 9 879 0 9.52e-01 acgatgtgc
9 313 C 9 632 0 9.52e-01 gtcacactt
9 340 P 9 580 0 9.52e-01 atgtaattt
9 341 P 9 777 0 9.52e-01 tgtaatttc
9 458 F 9 658 0 9.52e-01 cttttcaca
9 509 P 9 680 0 9.52e-01 gaaaaaatc
9 524 F 9 635 0 9.52e-01 tgtgaaaaa
9 557 F 9 683 0 9.52e-01 tttttccac
9 570 F 9 684 0 9.52e-01 ttttccaca
9 571 P 9 738 0 9.52e-01 tttccacaa
9 571 P 9 772 0 9.52e-01 tttccacaa
9 576 F 9 783 0 9.52e-01 acaaaaatt
9 624 F 9 790 0 9.52e-01 tttatccac
9 625 P 9 649 0 9.52e-01 ttatccaca
9 738 F 9 772 0 9.52e-01 ttgtggaaa
11 27 P 11 53 -1 1.96e+00 ggtgata[tc]cgc
11 41 P 11 372 -1 1.96e+00 cg[ga]tgaccggc
11 448 P 11 823 -1 1.96e+00 cc[ag]cgtagcgc
11 459 P 11 501 -1 1.96e+00 tt[tc]tcacaagt
11 511 F 11 578 -1 1.96e+00 aaaaat[ct]acat
11 523 F 11 694 -1 1.96e+00 ctgtg[ag]aaaac